5BOT		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	4UM, CA, ZN	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Fragment-based discovery of indole inhibitors of matrix metalloproteinase-13., Taylor SJ, Abeywardane A, Liang S, Muegge I, Padyana AK, Xiong Z, Hill-Drzewi M, Farmer B, Li X, Collins B, Li JX, Heim-Riether A, Proudfoot J, Zhang Q, Goldberg D, Zuvela-Jelaska L, Zaher H, Li J, Farrow NA, J Med Chem. 2011 Dec 8;54(23):8174-87. doi: 10.1021/jm201129m. Epub 2011 Nov 9. PMID:22017539

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk] Biological Unit Coordinates (5bot.pdb1.gz) 64 Kb LPC: Ligand-Protein Contacts for 5BOT CSU: Contacts of Structural Units for 5BOT Structure Factors (354 Kb) Retrieve 5BOT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5BOT from S2C, [Save to disk] Re-refined 5bot structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5BOT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5bot] [5bot_A] [5bot_B] SWISS-PROT database: Domain found in 5BOT: [ZnMc ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---