5BPD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL, IMD	enzyme
Gene Ontology	Chain Function Process Component A, D, B, C
Primary reference	Structural insights into nonspecific binding of DNA by TrmBL2, an archaeal chromatin protein., Ahmad MU, Waege I, Hausner W, Thomm M, Boos W, Diederichs K, Welte W, J Mol Biol. 2015 Aug 20. pii: S0022-2836(15)00458-1. doi:, 10.1016/j.jmb.2015.08.012. PMID:26299937

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (405 Kb) [Save to disk] Biological Unit Coordinates (5bpd.pdb1.gz) 397 Kb LPC: Ligand-Protein Contacts for 5BPD CSU: Contacts of Structural Units for 5BPD Structure Factors (633 Kb) Retrieve 5BPD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5BPD from S2C, [Save to disk] Re-refined 5bpd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5BPD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5bpd] [5bpd_A] [5bpd_B] [5bpd_C] [5bpd_D] [5bpd_E] [5bpd_F] SWISS-PROT database:

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