OCA Atlas for 5CAX

5CAX

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ACY, CD, SO4

enzyme

Gene

Gene
Ontology

Chain	Function	Process	Component
B, D, C, A	electron transfer activity protein disulfide oxidoreduc...

Primary reference

Structural and Biochemical Characterizations of Methanoredoxin from Methanosarcina acetivorans, a Glutaredoxin-Like Enzyme with Coenzyme M-Dependent Protein Disulfide Reductase Activity., Yenugudhati D, Prakash D, Kumar AK, Kumar RS, Yennawar NH, Yennawar HP, Ferry JG, Biochemistry. 2016 Jan 19;55(2):313-21. doi: 10.1021/acs.biochem.5b00823. Epub, 2015 Dec 30. PMID:26684934

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (140 Kb) [Save to disk]

Biological Unit Coordinates (5cax.pdb1.gz) 35 Kb

Biological Unit Coordinates (5cax.pdb2.gz) 34 Kb

Biological Unit Coordinates (5cax.pdb3.gz) 34 Kb

Biological Unit Coordinates (5cax.pdb4.gz) 35 Kb

LPC: Ligand-Protein Contacts for 5CAX

CSU: Contacts of Structural Units for 5CAX

Structure Factors (196 Kb)

Retrieve 5CAX in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5CAX from S2C, [Save to disk]

Re-refined 5cax structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5CAX in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5cax] [5cax_A] [5cax_B] [5cax_C] [5cax_D]

SWISS-PROT database:

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