OCA Atlas for 5CB6

5CB6

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ADX, ANP, CAC, MG, NA

enzyme

Gene
Ontology

Chain	Function	Process	Component
F, C, E, B, D, A

Primary reference

Recapitulating the Structural Evolution of Redox-Regulation in Adenosine-5'-Phosphosulfate Kinase from Cyanobacteria to Plants., Herrmann J, Nathin D, Lee SG, Sun T, Jez JM, J Biol Chem. 2015 Aug 20. pii: jbc.M115.679514. PMID:26294763

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (360 Kb) [Save to disk]

Biological Unit Coordinates (5cb6.pdb1.gz) 118 Kb

Biological Unit Coordinates (5cb6.pdb2.gz) 118 Kb

Biological Unit Coordinates (5cb6.pdb3.gz) 119 Kb

Biological Unit Coordinates (5cb6.pdb4.gz) 118 Kb

LPC: Ligand-Protein Contacts for 5CB6

CSU: Contacts of Structural Units for 5CB6

Structure Factors (659 Kb)

Retrieve 5CB6 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5CB6 from S2C, [Save to disk]

Re-refined 5cb6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5CB6 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5cb6] [5cb6_A] [5cb6_B] [5cb6_C] [5cb6_D] [5cb6_E] [5cb6_F]

SWISS-PROT database:

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