5CD4	Hydrolase Rna	date	Jul 03, 2015
title	The Type Ie Crispr Cascade Complex From E. Coli, With Two As In The Asymmetric Unit Arranged Back-To-Back
authors	R.N.Jackson, S.M.Golden, J.Carter, B.Wiedenheft
compound		source
Molecule: Crispr System Cascade Subunit Case Chain: A, M Synonym: Case Endornase,Crrna Endonuclease Ec: 3.1.-.- Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 83333 Strain: K12 Gene: Case, Cas6e, Ygch, B2756, Jw2726 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Crispr System Cascade Subunit Casc Chain: B, C, D, E, F, G, N, O, P, Q, R, S Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 83333 Strain: K12 Gene: Casc, Cas4, Cse4, Ygcj, B2758, Jw2728 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Crispr System Cascade Subunit Casd Chain: H, T Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 83333 Strain: K12 Gene: Casd, Cas5, Ygci, B2757, Jw5844 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Crispr System Cascade Subunit Casa Chain: I, U Synonym: Crispr Type I-Eecoli-Associated Protein Casacse1 Associated Protein Casacse1; Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 83333 Strain: K12 Gene: Casa, Cse1, Ygcl, B2760, Jw2730 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Crispr System Cascade Subunit Casb Chain: J, K, V, W Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 83333 Strain: K12 Gene: Casb, Cse2, Ygck, B2759, Jw2729 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Crrna Chain: L, X Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 83333 Strain: K-12 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.212 R_Free 0.250
crystal cell	length a length b length c angle alpha angle beta angle gamma 105.990 244.800 426.740 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.20 Å
ligand	23G, ZN	enzyme	Hydrolase E.C.3.1 BRENDA
Gene Ontology	Chain Function Process Component I, U K, V, J, W M, A S, F, N, E, Q, C, O, P, B, D, R, G T, H
Primary reference	Mechanism of CRISPR-RNA guided recognition of DNA targets in Escherichia coli., van Erp PB, Jackson RN, Carter J, Golden SM, Bailey S, Wiedenheft B, Nucleic Acids Res. 2015 Aug 3. pii: gkv793. PMID:26243775

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2249 Kb) [Save to disk] Biological Unit Coordinates (5cd4.pdb1.gz) 1128 Kb Biological Unit Coordinates (5cd4.pdb2.gz) 1105 Kb LPC: Ligand-Protein Contacts for 5CD4 CSU: Contacts of Structural Units for 5CD4 Structure Factors (1938 Kb) Retrieve 5CD4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5CD4 from S2C, [Save to disk] Re-refined 5cd4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5CD4 in 3D

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Visual 3D analysis of 5CD4

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5cd4_K] [5cd4_B] [5cd4_J] [5cd4_T] [5cd4_L] [5cd4_V] [5cd4] [5cd4_X] [5cd4_N] [5cd4_Q] [5cd4_O] [5cd4_D] [5cd4_S] [5cd4_I] [5cd4_P] [5cd4_U] [5cd4_A] [5cd4_H] [5cd4_G] [5cd4_C] [5cd4_E] [5cd4_M] [5cd4_R] [5cd4_W] [5cd4_F] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5CD4: [CRISPR_assoc ] by SMART

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