5CG9		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	5CM, AKG, EDO, MN, SO4	enzyme
Gene	NAEGRDRAFT
Primary reference	Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA., Hashimoto H, Pais JE, Dai N, Correa IR Jr, Zhang X, Zheng Y, Cheng X, Nucleic Acids Res. 2015 Aug 31. pii: gkv870. PMID:26323320

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk] Biological Unit Coordinates (5cg9.pdb1.gz) 54 Kb Biological Unit Coordinates (5cg9.pdb2.gz) 53 Kb LPC: Ligand-Protein Contacts for 5CG9 CSU: Contacts of Structural Units for 5CG9 Structure Factors (200 Kb) Retrieve 5CG9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5CG9 from S2C, [Save to disk] Re-refined 5cg9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5CG9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5cg9] [5cg9_A] [5cg9_B] [5cg9_C] [5cg9_D] [5cg9_E] [5cg9_F] SWISS-PROT database:

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