5CH3 Hydrolase date Jul 10, 2015
title E3 Alpha-Esterase-7 Carboxylesterase
authors G.Correy, P.Mabbitt, C.J.Jackson
compound source
Molecule: Carboxylic Ester Hydrolase
Chain: A
Ec: 3.1.1.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Lucilia Cuprina
Organism_common: Green Bottle Fly
Organism_taxid: 7375
Gene: Lcae7
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.171 R_Free 0.214
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.574 100.472 221.715 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.71 Å
ligand
enzyme Hydrolase E.C.3.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMapping the Accessible Conformational Landscape of an Insect Carboxylesterase Using Conformational Ensemble Analysis and Kinetic Crystallography., Correy GJ, Carr PD, Meirelles T, Mabbitt PD, Fraser NJ, Weik M, Jackson CJ, Structure. 2016 Jun 7;24(6):977-87. doi: 10.1016/j.str.2016.04.009. Epub 2016 May, 19. PMID:27210287
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (5ch3.pdb1.gz) 96 Kb
  • Biological Unit Coordinates (5ch3.pdb2.gz) 190 Kb
  • CSU: Contacts of Structural Units for 5CH3
  • Structure Factors (3666 Kb)
  • Retrieve 5CH3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5CH3 from S2C, [Save to disk]
  • Re-refined 5ch3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5CH3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5CH3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ch3_A] [5ch3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5CH3
  • Community annotation for 5CH3 at PDBWiki (http://pdbwiki.org)

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