5CHF Antiviral Protein date Jul 10, 2015
title Crystal Structure Of Murine Isg15 In Space Group P21212
authors G.Fritz, A.Basters
compound source
Molecule: Ubiquitin-Like Protein Isg15
Chain: A, B, C, D, E
Synonym: Interferon-Induced 15 Kda Protein,Interferon-Induc Protein,Ip17,Ubiquitin Cross-Reactive Protein;
Engineered: Yes
Mutation: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Isg15, G1p2, Ucrp
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptxb1
symmetry Space Group: P 21 21 2
R_factor 0.208 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.990 168.290 85.350 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (259 Kb) [Save to disk]
  • Biological Unit Coordinates (5chf.pdb1.gz) 52 Kb
  • Biological Unit Coordinates (5chf.pdb2.gz) 52 Kb
  • Biological Unit Coordinates (5chf.pdb3.gz) 51 Kb
  • Biological Unit Coordinates (5chf.pdb4.gz) 52 Kb
  • Biological Unit Coordinates (5chf.pdb5.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 5CHF
  • CSU: Contacts of Structural Units for 5CHF
  • Structure Factors (318 Kb)
  • Retrieve 5CHF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5CHF from S2C, [Save to disk]
  • Re-refined 5chf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5CHF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5CHF
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5chf_D] [5chf_B] [5chf] [5chf_A] [5chf_E] [5chf_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5CHF: [UBQ ] by SMART
  • Other resources with information on 5CHF
  • Community annotation for 5CHF at PDBWiki (http://pdbwiki.org)

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