5COB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAP, PG4, XOG enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, A, C, B


Primary referenceStructure of iridoid synthase in complex with NADP/8-oxogeranial reveals the structural basis of its substrate specificity., Qin L, Zhu Y, Ding Z, Zhang X, Ye S, Zhang R, J Struct Biol. 2016 Feb 8. pii: S1047-8477(16)30025-9. doi:, 10.1016/j.jsb.2016.02.010. PMID:26868105
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (494 Kb) [Save to disk]
  • Biological Unit Coordinates (5cob.pdb1.gz) 245 Kb
  • Biological Unit Coordinates (5cob.pdb2.gz) 245 Kb
  • LPC: Ligand-Protein Contacts for 5COB
  • CSU: Contacts of Structural Units for 5COB
  • Structure Factors (584 Kb)
  • Retrieve 5COB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5COB from S2C, [Save to disk]
  • Re-refined 5cob structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5COB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5cob] [5cob_A] [5cob_B] [5cob_C] [5cob_D]
  • SWISS-PROT database:

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