5COT		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	AMP, UNX	enzyme
Gene	NAEGRDRAFT
Gene Ontology	Chain Function Process Component A
Primary reference	Structure and two-metal mechanism of a eukaryal nick-sealing RNA ligase., Unciuleac MC, Goldgur Y, Shuman S, Proc Natl Acad Sci U S A. 2015 Nov 10;112(45):13868-73. doi:, 10.1073/pnas.1516536112. Epub 2015 Oct 28. PMID:26512110

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk] Biological Unit Coordinates (5cot.pdb1.gz) 65 Kb LPC: Ligand-Protein Contacts for 5COT CSU: Contacts of Structural Units for 5COT Structure Factors (704 Kb) Retrieve 5COT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5COT from S2C, [Save to disk] Re-refined 5cot structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5COT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5cot] [5cot_A] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---