5CP6	Nucleosome Core Particle with Adducts from the Anticancer Compound, [(eta6-5,8,9,10-tetrahydroanthracene)Ru(ethylenediamine)Cl][PF6]	date
authors	Ma, Z., Adhireksan, Z., Murray, B.S., Dyson, P.J., Davey, C.A.
compound		source
symmetry		R_factor R_Free 0.25064
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.60
ligand	MG, RUH, SO4	enzyme
Gene Ontology	Chain Function Process Component A, E C, G F, B H, D
Primary reference	An Organometallic Compound which Exhibits a DNA Topology-Dependent One-Stranded Intercalation Mode., Ma Z, Palermo G, Adhireksan Z, Murray BS, von Erlach T, Dyson PJ, Rothlisberger U, Davey CA, Angew Chem Int Ed Engl. 2016 May 17. doi: 10.1002/anie.201602145. PMID:27184539

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (252 Kb) [Save to disk] Biological Unit Coordinates (5cp6.pdb1.gz) 244 Kb LPC: Ligand-Protein Contacts for 5CP6 CSU: Contacts of Structural Units for 5CP6 Structure Factors (3114 Kb) Retrieve 5CP6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5CP6 from S2C, [Save to disk] Re-refined 5cp6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5CP6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5CP6

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 5cp6 from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5cp6] [5cp6_H] [5cp6_F] [5cp6_G] [5cp6_I] [5cp6_C] [5cp6_J] [5cp6_B] [5cp6_E] [5cp6_A] [5cp6_D] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5CP6: [H2A] [H2B] [H3] [H4 ] by SMART

Other resources with information on 5CP6

Community annotation for 5CP6 at PDBWiki (http://pdbwiki.org)

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