5CUF Oxidoreductase date Jul 24, 2015
title X-Ray Crystal Structure Of Semet Human Sestrin2
authors H.Kim, S.An, S.H.Ro, J.H.Lee, U.S.Cho
compound source
Molecule: Sestrin-2
Chain: A, B, C, D, E
Synonym: Hi95
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sesn2, Sest2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 3
R_factor 0.235 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
292.680 292.680 292.680 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.50 Å
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B
  • mitochondrial DNA metabolic ...

    • Primary referenceJanus-faced Sestrin2 controls ROS and mTOR signalling through two separate functional domains., Kim H, An S, Ro SH, Teixeira F, Jin Park G, Kim C, Cho CS, Kim JS, Jakob U, Hee Lee J, Cho US, Nat Commun. 2015 Nov 27;6:10025. doi: 10.1038/ncomms10025. PMID:26612684
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (320 Kb) [Save to disk]
  • Biological Unit Coordinates (5cuf.pdb1.gz) 66 Kb
  • Biological Unit Coordinates (5cuf.pdb2.gz) 65 Kb
  • Biological Unit Coordinates (5cuf.pdb3.gz) 66 Kb
  • Biological Unit Coordinates (5cuf.pdb4.gz) 66 Kb
  • Biological Unit Coordinates (5cuf.pdb5.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 5CUF
  • CSU: Contacts of Structural Units for 5CUF
  • Structure Factors (1092 Kb)
  • Retrieve 5CUF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5CUF from S2C, [Save to disk]
  • Re-refined 5cuf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5CUF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5CUF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5cuf_D] [5cuf_E] [5cuf_B] [5cuf] [5cuf_C] [5cuf_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5CUF
  • Community annotation for 5CUF at PDBWiki (http://pdbwiki.org)

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