5CZM	Hydrolase	date	Jul 31, 2015
title	Crystal Structure Of A Mutated Catalytic Domain Of Human Mmp Complex With Rxp470
authors	C.Rouanet-Mehouas, L.Roselia, L.Devel, V.Dive, E.A.Stura
compound		source
Molecule: Macrophage Metalloelastase Chain: A Fragment: Unp Residues 106-263 Synonym: Mme,Macrophage Elastase,Hme,Matrix Metalloproteina 12; Ec: 3.4.24.65 Engineered: Yes Mutation: Yes Other_details: Mmp12 F171d K241a Mutant For Calorimetric St Catalytic Domain (Unp Residues 106-263)		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mmp12, Hme Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet24a
symmetry	Space Group: P 21 21 2	R_factor 0.145 R_Free 0.174
crystal cell	length a length b length c angle alpha angle beta angle gamma 68.970 63.290 35.910 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.30 Å
ligand	CA, R47, ZN	enzyme	Hydrolase E.C.3.4.24.65 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Zinc-Metalloproteinase Inhibitors: Evaluation of the Complex Role Played by the Zinc-Binding Group on Potency and Selectivity., Rouanet-Mehouas C, Czarny B, Beau F, Cassar-Lajeunesse E, Stura EA, Dive V, Devel L, J Med Chem. 2017 Jan 12;60(1):403-414. doi: 10.1021/acs.jmedchem.6b01420. Epub, 2016 Dec 20. PMID:27996256

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk] Biological Unit Coordinates (5czm.pdb1.gz) 67 Kb LPC: Ligand-Protein Contacts for 5CZM CSU: Contacts of Structural Units for 5CZM Structure Factors (652 Kb) Retrieve 5CZM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5CZM from S2C, [Save to disk] Re-refined 5czm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5CZM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5CZM

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5czm_A] [5czm] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5CZM: [ZnMc ] by SMART

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