5D0Z		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	3BV, CL, MES, MG	enzyme
Gene Ontology	Chain Function Process Component A, O proteasome core complex, alp... B, P proteasome core complex, alp... C, Q E, S proteasome core complex, alp... F, T proteasome core complex, alp... G, U proteasome core complex, alp... H, K, Y, V L, Z N, b proteasome core complex, bet... R, D proteasome core complex, alp... W, I endopeptidase activator acti... proteasome core complex, bet... X, J endopeptidase activator acti... proteasome core complex, bet... a, M proteasome core complex, bet...
Primary reference	A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome., Huber EM, Heinemeyer W, Li X, Arendt CS, Hochstrasser M, Groll M, Nat Commun. 2016 Mar 11;7:10900. doi: 10.1038/ncomms10900. PMID:26964885

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2064 Kb) [Save to disk] Biological Unit Coordinates (5d0z.pdb1.gz) 2048 Kb LPC: Ligand-Protein Contacts for 5D0Z CSU: Contacts of Structural Units for 5D0Z Structure Factors (4170 Kb) Retrieve 5D0Z in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5D0Z from S2C, [Save to disk] Re-refined 5d0z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5D0Z in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5d0z_I] [5d0z_J] [5d0z_K] [5d0z_L] [5d0z_M] [5d0z_N] [5d0z_P] [5d0z_Q] [5d0z] [5d0z_A] [5d0z_B] [5d0z_C] [5d0z_D] [5d0z_E] [5d0z_F] [5d0z_G] [5d0z_H] [5d0z_O] [5d0z_R] [5d0z_S] [5d0z_T] [5d0z_U] [5d0z_V] [5d0z_W] [5d0z_X] [5d0z_Y] [5d0z_Z] [5d0z_a] [5d0z_b] SWISS-PROT database: Domain found in 5D0Z: [Proteasome_A_N ] by SMART

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