5D21 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 56N, CA enzyme
Gene ERS445055 ; PA257 ; PA8380 ; PAE221 ; PAMH19 ; YQ19
Gene
Ontology
ChainFunctionProcessComponent
C, A, B, D


Primary referenceMultivalency effects on Pseudomonas aeruginosa biofilm inhibition and dispersal by glycopeptide dendrimers targeting lectin LecA., Bergmann M, Michaud G, Visini R, Jin X, Gillon E, Stocker A, Imberty A, Darbre T, Reymond JL, Org Biomol Chem. 2015 Sep 29. PMID:26416170
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (5d21.pdb1.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 5D21
  • CSU: Contacts of Structural Units for 5D21
  • Structure Factors (3352 Kb)
  • Retrieve 5D21 in mmCIF format [Save to disk]
  • Re-refined 5d21 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5D21 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5d21] [5d21_A] [5d21_B] [5d21_C] [5d21_D]
  • SWISS-PROT database:

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