5D5E date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PE5, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceIn meso in situ serial X-ray crystallography of soluble and membrane proteins at cryogenic temperatures., Huang CY, Olieric V, Ma P, Howe N, Vogeley L, Liu X, Warshamanage R, Weinert T, Panepucci E, Kobilka B, Diederichs K, Wang M, Caffrey M, Acta Crystallogr D Struct Biol. 2016 Jan;72(Pt 1):93-112. doi:, 10.1107/S2059798315021683. Epub 2016 Jan 1. PMID:26894538
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (5d5e.pdb1.gz) 11 Kb
  • LPC: Ligand-Protein Contacts for 5D5E
  • CSU: Contacts of Structural Units for 5D5E
  • Structure Factors (99 Kb)
  • Retrieve 5D5E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5D5E from S2C, [Save to disk]
  • Re-refined 5d5e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5D5E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5d5e] [5d5e_A] [5d5e_B]
  • SWISS-PROT database:
  • Domain found in 5D5E: [IlGF ] by SMART

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