5D7A date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 58C, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, B, A


Primary referenceTNIK inhibition abrogates colorectal cancer stemness., Masuda M, Uno Y, Ohbayashi N, Ohata H, Mimata A, Kukimoto-Niino M, Moriyama H, Kashimoto S, Inoue T, Goto N, Okamoto K, Shirouzu M, Sawa M, Yamada T, Nat Commun. 2016 Aug 26;7:12586. doi: 10.1038/ncomms12586. PMID:27562646
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (146 Kb) [Save to disk]
  • Biological Unit Coordinates (5d7a.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (5d7a.pdb2.gz) 48 Kb
  • Biological Unit Coordinates (5d7a.pdb3.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 5D7A
  • CSU: Contacts of Structural Units for 5D7A
  • Structure Factors (590 Kb)
  • Retrieve 5D7A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5D7A from S2C, [Save to disk]
  • Re-refined 5d7a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5D7A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5d7a] [5d7a_A] [5d7a_B] [5d7a_C]
  • SWISS-PROT database:
  • Domain found in 5D7A: [S_TKc ] by SMART

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