5D87		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	K, MG, PLP	enzyme
Gene	NWMN
Gene Ontology	Chain Function Process Component A
Primary reference	Deciphering the Substrate Specificity of SbnA, the Enzyme Catalyzing the First Step in Staphyloferrin B Biosynthesis., Kobylarz MJ, Grigg JC, Liu Y, Lee MS, Heinrichs DE, Murphy ME, Biochemistry. 2016 Jan 21. PMID:26794841

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk] Biological Unit Coordinates (5d87.pdb1.gz) 219 Kb LPC: Ligand-Protein Contacts for 5D87 CSU: Contacts of Structural Units for 5D87 Structure Factors (2723 Kb) Retrieve 5D87 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5D87 from S2C, [Save to disk] Re-refined 5d87 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5D87 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5d87] [5d87_A] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---