5D8J		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Development of a therapeutic monoclonal antibody that targets secreted fatty acid-binding protein aP2 to treat type 2 diabetes., Burak MF, Inouye KE, White A, Lee A, Tuncman G, Calay ES, Sekiya M, Tirosh A, Eguchi K, Birrane G, Lightwood D, Howells L, Odede G, Hailu H, West S, Garlish R, Neale H, Doyle C, Moore A, Hotamisligil GS, Sci Transl Med. 2015 Dec 23;7(319):319ra205. doi: 10.1126/scitranslmed.aac6336., Epub 2015 Dec 23. PMID:26702093

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (181 Kb) [Save to disk] Biological Unit Coordinates (5d8j.pdb1.gz) 175 Kb LPC: Ligand-Protein Contacts for 5D8J CSU: Contacts of Structural Units for 5D8J Structure Factors (240 Kb) Retrieve 5D8J in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5D8J from S2C, [Save to disk] Re-refined 5d8j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5D8J in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5d8j_A] [5d8j] [5d8j_H] [5d8j_L] SWISS-PROT database: Domains found in 5D8J: [IG_like] [IGv ] by SMART

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