5DAS	Transferase	date	Aug 20, 2015
title	Structure Of Mycobacterium Tuberculosis Nadd In Complex With P21212, Form 2
authors	K.V.Korotkov
compound		source
Molecule: Nicotinate-Nucleotide Adenylyltransferase Chain: B, C, D, A Fragment: Residues 1-192 Synonym: Deamido-Nad(+) Diphosphorylase,Deamido-Nad(+) Pyrophosphorylase,Nicotinate Mononucleotide Adenylyltransfe Adenylyltransferase; Ec: 2.7.7.18 Engineered: Yes Mutation: Yes		Organism_scientific: Mycobacterium Tuberculosis Organism_taxid: 83332 Strain: Atcc 25618 H37rv Gene: Nadd, Rv2421c, Mtcy428.26 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta2(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Prsf-Nt
symmetry	Space Group: P 21 21 2	R_factor 0.194 R_Free 0.239
crystal cell	length a length b length c angle alpha angle beta angle gamma 117.820 156.130 48.950 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	NAP	enzyme	Transferase E.C.2.7.7.18 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk] Biological Unit Coordinates (5das.pdb1.gz) 65 Kb Biological Unit Coordinates (5das.pdb2.gz) 61 Kb Biological Unit Coordinates (5das.pdb3.gz) 123 Kb LPC: Ligand-Protein Contacts for 5DAS CSU: Contacts of Structural Units for 5DAS Structure Factors (858 Kb) Retrieve 5DAS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DAS from S2C, [Save to disk] Re-refined 5das structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DAS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5DAS

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5das_A] [5das_C] [5das_B] [5das] [5das_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5DAS

Community annotation for 5DAS at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---