5DCV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GTP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C
  • ribonuclease P activity


    • Primary referenceStructural basis for recognition of a kink-turn motif by an archaeal homologue of human RNase P protein Rpp38., Oshima K, Kakiuchi Y, Tanaka Y, Ueda T, Nakashima T, Kimura M, Yao M, Biochem Biophys Res Commun. 2016 Jun 3;474(3):541-6. doi:, 10.1016/j.bbrc.2016.04.118. Epub 2016 Apr 23. PMID:27114305
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]
  • Biological Unit Coordinates (5dcv.pdb1.gz) 39 Kb
  • Biological Unit Coordinates (5dcv.pdb2.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 5DCV
  • CSU: Contacts of Structural Units for 5DCV
  • Structure Factors (101 Kb)
  • Retrieve 5DCV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DCV from S2C, [Save to disk]
  • Re-refined 5dcv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5DCV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dcv] [5dcv_A] [5dcv_B] [5dcv_C] [5dcv_D]
  • SWISS-PROT database:

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