5DD6		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Primary reference	Initiation of immune tolerance-controlled HIV gp41 neutralizing B cell lineages., Zhang R, Verkoczy L, Wiehe K, Munir Alam S, Nicely NI, Santra S, Bradley T, Pemble CW 4th, Zhang J, Gao F, Montefiori DC, Bouton-Verville H, Kelsoe G, Larimore K, Greenberg PD, Parks R, Foulger A, Peel JN, Luo K, Lu X, Trama AM, Vandergrift N, Tomaras GD, Kepler TB, Moody MA, Liao HX, Haynes BF, Sci Transl Med. 2016 Apr 27;8(336):336ra62. doi: 10.1126/scitranslmed.aaf0618. PMID:27122615

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (281 Kb) [Save to disk] Biological Unit Coordinates (5dd6.pdb1.gz) 140 Kb Biological Unit Coordinates (5dd6.pdb2.gz) 138 Kb CSU: Contacts of Structural Units for 5DD6 Structure Factors (1507 Kb) Retrieve 5DD6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DD6 from S2C, [Save to disk] Re-refined 5dd6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DD6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dd6_B] [5dd6_A] [5dd6_H] [5dd6_L] [5dd6] SWISS-PROT database: Domains found in 5DD6: [IG_like] [IGv ] by SMART

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