5DEF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, GOL	enzyme
Gene Ontology	Chain Function Process Component B cellular response to iron io...
Primary reference	Increased conformational flexibility characterizes HLA-B*27 subtypes associated with ankylosing spondylitis., Loll B, Fabian H, Huser H, Hee CS, Ziegler A, Uchanska-Ziegler B, Ziegler A, Arthritis Rheumatol. 2016 Jan 8. doi: 10.1002/art.39567. PMID:26748477

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk] Biological Unit Coordinates (5def.pdb1.gz) 146 Kb LPC: Ligand-Protein Contacts for 5DEF CSU: Contacts of Structural Units for 5DEF Structure Factors (1084 Kb) Retrieve 5DEF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DEF from S2C, [Save to disk] Re-refined 5def structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DEF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5def] [5def_A] [5def_B] [5def_C] SWISS-PROT database: Domain found in 5DEF: [IGc1 ] by SMART

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