5DG2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GAL, GLC enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceHuman galectin-2 interacts with carbohydrates and peptides non-classically: new insight from X-ray crystallography and hemagglutination., Si Y, Feng S, Gao J, Wang Y, Zhang Z, Meng Y, Zhou Y, Tai G, Su J, Acta Biochim Biophys Sin (Shanghai). 2016 Aug 25. PMID:27563008
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (5dg2.pdb1.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 5DG2
  • CSU: Contacts of Structural Units for 5DG2
  • Structure Factors (595 Kb)
  • Retrieve 5DG2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DG2 from S2C, [Save to disk]
  • Re-refined 5dg2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DG2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dg2] [5dg2_A] [5dg2_B]
  • SWISS-PROT database:
  • Domains found in 5DG2: [GLECT] [Gal-bind_lectin ] by SMART

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science