5DGY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component C, A, B, D
Primary reference	X-ray laser diffraction for structure determination of the rhodopsin-arrestin complex., Zhou XE, Gao X, Barty A, Kang Y, He Y, Liu W, Ishchenko A, White TA, Yefanov O, Han GW, Xu Q, de Waal PW, Suino-Powell KM, Boutet S, Williams GJ, Wang M, Li D, Caffrey M, Chapman HN, Spence JC, Fromme P, Weierstall U, Stevens RC, Cherezov V, Melcher K, Xu HE, Sci Data. 2016 Apr 12;3:160021. doi: 10.1038/sdata.2016.21. PMID:27070998

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1093 Kb) [Save to disk] Biological Unit Coordinates (5dgy.pdb1.gz) 564 Kb Biological Unit Coordinates (5dgy.pdb2.gz) 524 Kb CSU: Contacts of Structural Units for 5DGY Structure Factors (110 Kb) Retrieve 5DGY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DGY from S2C, [Save to disk] Re-refined 5dgy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DGY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dgy] [5dgy_A] [5dgy_B] [5dgy_C] [5dgy_D] SWISS-PROT database: Domain found in 5DGY: [Arrestin_C ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---