5DH8		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ZN	enzyme
Primary reference	Two Divalent Metal Ions and Conformational Changes Play Roles in the Hammerhead Ribozyme Cleavage Reaction., Mir A, Chen J, Robinson K, Lendy E, Goodman J, Neau D, Golden BL, Biochemistry. 2015 Oct 2. PMID:26398724

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk] Biological Unit Coordinates (5dh8.pdb1.gz) 43 Kb LPC: Ligand-Protein Contacts for 5DH8 CSU: Contacts of Structural Units for 5DH8 Structure Factors (142 Kb) Retrieve 5DH8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DH8 from S2C, [Save to disk] Re-refined 5dh8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DH8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dh8] [5dh8_A] [5dh8_B] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---