5DIS Crystal structure of a CRM1-RanGTP-SPN1 export complex bound to a 113 amino acid FG-repeat containing fragment of Nup214 date
authors Monecke, T., Port, S.A., Dickmanns, A., Kehlenbach, R.H., Ficner, R.
compound source
symmetry
R_factor
R_Free 0.2493
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.85
ligand GLC, GTP, MG, PRO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein binding
  • intracellular transport of v...

    • B


    C


    D
  • carbohydrate transmembrane t...


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (642 Kb) [Save to disk]
  • Biological Unit Coordinates (5dis.pdb1.gz) 634 Kb
  • LPC: Ligand-Protein Contacts for 5DIS
  • CSU: Contacts of Structural Units for 5DIS
  • Structure Factors (1599 Kb)
  • Retrieve 5DIS in mmCIF format [Save to disk]
  • Re-refined 5dis structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5DIS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5DIS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5dis from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dis_D] [5dis_B] [5dis_C] [5dis] [5dis_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 5DIS: [CRM1_C] [IBN_N] [RAN ] by SMART
    • Other resources with information on 5DIS
  • Community annotation for 5DIS at PDBWiki (http://pdbwiki.org)

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