5DL1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5C2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
N, C, J, M, E, F, A, G, D, K, H, L, B, I


Primary referenceReversible Inhibitors Arrest ClpP in a Defined Conformational State that Can Be Revoked by ClpX Association., Pahl A, Lakemeyer M, Vielberg MT, Hackl MW, Vomacka J, Korotkov VS, Stein ML, Fetzer C, Lorenz-Baath K, Richter K, Waldmann H, Groll M, Sieber SA, Angew Chem Int Ed Engl. 2015 Nov 13. doi: 10.1002/anie.201507266. PMID:26566002
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (886 Kb) [Save to disk]
  • Biological Unit Coordinates (5dl1.pdb1.gz) 875 Kb
  • LPC: Ligand-Protein Contacts for 5DL1
  • CSU: Contacts of Structural Units for 5DL1
  • Structure Factors (1047 Kb)
  • Retrieve 5DL1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DL1 from S2C, [Save to disk]
  • Re-refined 5dl1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DL1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dl1] [5dl1_A] [5dl1_B] [5dl1_C] [5dl1_D] [5dl1_E] [5dl1_F] [5dl1_G] [5dl1_H] [5dl1_I] [5dl1_J] [5dl1_K] [5dl1_L] [5dl1_M] [5dl1_N]
  • SWISS-PROT database:

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