5DTC date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene H781
Primary referenceThe Crystal Structure of the Ubiquitin-Like Domain of Ribosome Assembly Factor Ytm1 and Characterization of its Interaction with the AAA-ATPase Midasin., Romes EM, Sobhany M, Stanley RE, J Biol Chem. 2015 Nov 24. pii: jbc.M115.693259. PMID:26601951
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]
  • Biological Unit Coordinates (5dtc.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (5dtc.pdb2.gz) 31 Kb
  • CSU: Contacts of Structural Units for 5DTC
  • Structure Factors (315 Kb)
  • Retrieve 5DTC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DTC from S2C, [Save to disk]
  • Re-refined 5dtc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5DTC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dtc] [5dtc_A] [5dtc_B]
  • SWISS-PROT database:

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