5DUN date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand K, MG, OMU enzyme
Primary referenceA Mini-Twister Variant and Impact of Residues/Cations on the Phosphodiester Cleavage of this Ribozyme Class., Kosutic M, Neuner S, Ren A, Flur S, Wunderlich C, Mairhofer E, Vusurovic N, Seikowski J, Breuker K, Hobartner C, Patel DJ, Kreutz C, Micura R, Angew Chem Int Ed Engl. 2015 Dec 7;54(50):15128-33. doi: 10.1002/anie.201506601. , Epub 2015 Oct 16. PMID:26473980
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]
  • Biological Unit Coordinates (5dun.pdb1.gz) 24 Kb
  • LPC: Ligand-Protein Contacts for 5DUN
  • CSU: Contacts of Structural Units for 5DUN
  • Structure Factors (53 Kb)
  • Retrieve 5DUN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DUN from S2C, [Save to disk]
  • Re-refined 5dun structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5DUN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dun] [5dun_A]
  • SWISS-PROT database:

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