5DZJ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	6B7	enzyme
Gene	P425 ; RVBD
Gene Ontology	Chain Function Process Component A, B peptidoglycan L,D-transpepti...
Primary reference	Non-classical transpeptidases yield insight into new antibacterials., Kumar P, Kaushik A, Lloyd EP, Li SG, Mattoo R, Ammerman NC, Bell DT, Perryman AL, Zandi TA, Ekins S, Ginell SL, Townsend CA, Freundlich JS, Lamichhane G, Nat Chem Biol. 2016 Nov 7. doi: 10.1038/nchembio.2237. PMID:27820797

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk] Biological Unit Coordinates (5dzj.pdb1.gz) 62 Kb Biological Unit Coordinates (5dzj.pdb2.gz) 61 Kb LPC: Ligand-Protein Contacts for 5DZJ CSU: Contacts of Structural Units for 5DZJ Structure Factors (712 Kb) Retrieve 5DZJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DZJ from S2C, [Save to disk] Re-refined 5dzj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DZJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dzj] [5dzj_A] [5dzj_B] SWISS-PROT database:

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