5DZU date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, GOL, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A
  • endopeptidase inhibitor acti...
  • serine-type endopeptidase in...
  • aspartic-type endopeptidase ...


  • Primary referenceStructure of a Kunitz-type potato cathepsin D inhibitor., Guo J, Erskine PT, Coker AR, Wood SP, Cooper JB, J Struct Biol. 2015 Dec;192(3):554-60. doi: 10.1016/j.jsb.2015.10.020. Epub 2015 , Nov 2. PMID:26542926
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (5dzu.pdb1.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 5DZU
  • CSU: Contacts of Structural Units for 5DZU
  • Structure Factors (363 Kb)
  • Retrieve 5DZU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DZU from S2C, [Save to disk]
  • Re-refined 5dzu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DZU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dzu] [5dzu_A] [5dzu_B]
  • SWISS-PROT database:
  • Domain found in 5DZU: [STI ] by SMART

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science