5E9B	Hydrolase	date	Oct 14, 2015
title	Crystal Structure Of Human Heparanase In Complex With Hepmer
authors	L.Wu, G.J.Davies
compound		source
Molecule: Heparanase Chain: A Fragment: Residues 158-543 Synonym: Endo-Glucoronidase,Heparanase-1,Hpa1 Ec: 3.2.1.166 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hpse, Hep, Hpa, Hpa1, Hpr1, Hpse1, Hse1 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111
Molecule: Heparanase Chain: B Fragment: Residues 36-109 Synonym: Endo-Glucoronidase,Heparanase-1,Hpa1 Ec: 3.2.1.166 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hpse, Hep, Hpa, Hpa1, Hpr1, Hpse1, Hse1 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111
symmetry	Space Group: P 1 21 1	R_factor 0.178 R_Free 0.217
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.990 71.060 78.290 90.00 95.09 90.00
method	X-Ray Diffraction	resolution	1.88 Å
ligand	BDP, CL, GNS, NAG, SGN	enzyme	Hydrolase E.C.3.2.1.166 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural characterization of human heparanase reveals insights into substrate recognition., Wu L, Viola CM, Brzozowski AM, Davies GJ, Nat Struct Mol Biol. 2015 Nov 16. doi: 10.1038/nsmb.3136. PMID:26575439

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk] Biological Unit Coordinates (5e9b.pdb1.gz) 152 Kb LPC: Ligand-Protein Contacts for 5E9B CSU: Contacts of Structural Units for 5E9B Structure Factors (2749 Kb) Retrieve 5E9B in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5E9B from S2C, [Save to disk] Re-refined 5e9b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5e9b_B] [5e9b_A] [5e9b] SWISS-PROT database: Domain organization of by SWISSPFAM

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