5EDG date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5MG, CME, MG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A, C, D


Primary referenceA Real-World Perspective on Molecular Design., Kuhn B, Guba W, Hert J, Banner D, Bissantz C, Ceccarelli S, Haap W, Korner M, Kuglstatter A, Lerner C, Mattei P, Neidhart W, Pinard E, Rudolph MG, Schulz-Gasch T, Woltering T, Stahl M, J Med Chem. 2016 Feb 24. PMID:26878596
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (216 Kb) [Save to disk]
  • Biological Unit Coordinates (5edg.pdb1.gz) 56 Kb
  • Biological Unit Coordinates (5edg.pdb2.gz) 56 Kb
  • Biological Unit Coordinates (5edg.pdb3.gz) 55 Kb
  • Biological Unit Coordinates (5edg.pdb4.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 5EDG
  • CSU: Contacts of Structural Units for 5EDG
  • Structure Factors (6819 Kb)
  • Retrieve 5EDG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EDG from S2C, [Save to disk]
  • Re-refined 5edg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EDG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5edg] [5edg_A] [5edg_B] [5edg_C] [5edg_D]
  • SWISS-PROT database:
  • Domain found in 5EDG: [HDc ] by SMART

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