5EDH date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5MF, CME, MG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B, C, D


Primary referenceA Real-World Perspective on Molecular Design., Kuhn B, Guba W, Hert J, Banner D, Bissantz C, Ceccarelli S, Haap W, Korner M, Kuglstatter A, Lerner C, Mattei P, Neidhart W, Pinard E, Rudolph MG, Schulz-Gasch T, Woltering T, Stahl M, J Med Chem. 2016 Feb 24. PMID:26878596
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (221 Kb) [Save to disk]
  • Biological Unit Coordinates (5edh.pdb1.gz) 57 Kb
  • Biological Unit Coordinates (5edh.pdb2.gz) 57 Kb
  • Biological Unit Coordinates (5edh.pdb3.gz) 57 Kb
  • Biological Unit Coordinates (5edh.pdb4.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 5EDH
  • CSU: Contacts of Structural Units for 5EDH
  • Structure Factors (10923 Kb)
  • Retrieve 5EDH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EDH from S2C, [Save to disk]
  • Re-refined 5edh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EDH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5edh] [5edh_A] [5edh_B] [5edh_C] [5edh_D]
  • SWISS-PROT database:
  • Domain found in 5EDH: [HDc ] by SMART

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