5EG0	Transcription	date	Oct 26, 2015
title	Hoxb13-Meis1 Heterodimer Bound To Dna
authors	E.Morgunova, Y.Yin, A.Jolma, A.Popov, J.Taipale
compound		source
Molecule: Homeobox Protein Meis2 Chain: A Fragment: Unp Residues 284-338 Synonym: Meis1-Related Protein 1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Meis2, Mrg1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_variant: Rosetta Expression_system_vector_type: Plasmid Expression_system_plasmid: Petg20a
Molecule: Dna (5'- D(Pgptptpgpapcpapgptptptptpapcpgpapgpg)-3 Chain: D Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Dna (5'- D(Cpcptpcpgptpapapapapcptpgptpcpapapc)-3' Chain: E Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Homeobox Protein Hox-B13 Chain: B Fragment: Unp Residues 217-277 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hoxb13 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_variant: Rosetta Expression_system_vector_type: Plasmid Expression_system_plasmid: Petg20a
symmetry	Space Group: P 21 21 21	R_factor 0.286 R_Free 0.322
crystal cell	length a length b length c angle alpha angle beta angle gamma 41.726 56.332 115.152 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.10 Å
Gene Ontology	Chain Function Process Component A B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk] Biological Unit Coordinates (5eg0.pdb1.gz) 101 Kb CSU: Contacts of Structural Units for 5EG0 Structure Factors (405 Kb) Retrieve 5EG0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5EG0 from S2C, [Save to disk] Re-refined 5eg0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5EG0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5EG0

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5eg0_E] [5eg0_D] [5eg0_A] [5eg0_B] [5eg0] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5EG0: [HOX ] by SMART

Other resources with information on 5EG0

Community annotation for 5EG0 at PDBWiki (http://pdbwiki.org)

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