5EG4 Hydrolase date Oct 26, 2015
title Bovine Trypsin In Complex With Cyclic Inhibitor
authors A.Knoerlein, S.Wagner, A.Heine, T.Steinmetzer, G.Klebe
compound source
Molecule: Cationic Trypsin
Chain: A
Synonym: Beta-Trypsin
Ec: 3.4.21.4
 Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
symmetry Space Group: P 41 21 2
R_factor 0.180 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.502 61.502 102.239 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.32 Å
ligand 5N7, ACT, CA, SO4 enzyme Hydrolase E.C.3.4.21.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (5eg4.pdb1.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 5EG4
  • CSU: Contacts of Structural Units for 5EG4
  • Structure Factors (919 Kb)
  • Retrieve 5EG4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EG4 from S2C, [Save to disk]
  • Re-refined 5eg4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5EG4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5EG4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5eg4] [5eg4_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5EG4: [Tryp_SPc ] by SMART
    • Other resources with information on 5EG4
  • Community annotation for 5EG4 at PDBWiki (http://pdbwiki.org)

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