5EMA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, SEP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA molecular code for endosomal recycling of phosphorylated cargos by the SNX27-retromer complex., Clairfeuille T, Mas C, Chan AS, Yang Z, Tello-Lafoz M, Chandra M, Widagdo J, Kerr MC, Paul B, Merida I, Teasdale RD, Pavlos NJ, Anggono V, Collins BM, Nat Struct Mol Biol. 2016 Sep 5. doi: 10.1038/nsmb.3290. PMID:27595347
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (5ema.pdb1.gz) 34 Kb
  • LPC: Ligand-Protein Contacts for 5EMA
  • CSU: Contacts of Structural Units for 5EMA
  • Structure Factors (502 Kb)
  • Retrieve 5EMA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EMA from S2C, [Save to disk]
  • Re-refined 5ema structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EMA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ema] [5ema_A] [5ema_B]
  • SWISS-PROT database:
  • Domain found in 5EMA: [PDZ ] by SMART

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