5EQ1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BEA, NO3 enzyme
Primary referenceTwenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions., Zhu J, Caflisch A, J Med Chem. 2016 May 24. PMID:27167503
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (5eq1.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 5EQ1
  • CSU: Contacts of Structural Units for 5EQ1
  • Structure Factors (185 Kb)
  • Retrieve 5EQ1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EQ1 from S2C, [Save to disk]
  • Re-refined 5eq1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EQ1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5EQ1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5eq1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5eq1] [5eq1_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5EQ1: [BROMO ] by SMART
  • Other resources with information on 5EQ1
  • Community annotation for 5EQ1 at PDBWiki (http://pdbwiki.org)

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