5F9W date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
G, A


Primary referenceMaturation Pathway from Germline to Broad HIV-1 Neutralizer of a CD4-Mimic Antibody., Bonsignori M, Zhou T, Sheng Z, Chen L, Gao F, Joyce MG, Ozorowski G, Chuang GY, Schramm CA, Wiehe K, Alam SM, Bradley T, Gladden MA, Hwang KK, Iyengar S, Kumar A, Lu X, Luo K, Mangiapani MC, Parks RJ, Song H, Acharya P, Bailer RT, Cao A, Druz A, Georgiev IS, Kwon YD, Louder MK, Zhang B, Zheng A, Hill BJ, Kong R, Soto C, Mullikin JC, Douek DC, Montefiori DC, Moody MA, Shaw GM, Hahn BH, Kelsoe G, Hraber PT, Korber BT, Boyd SD, Fire AZ, Kepler TB, Shapiro L, Ward AB, Mascola JR, Liao HX, Kwong PD, Haynes BF, Cell. 2016 Apr 7;165(2):449-63. doi: 10.1016/j.cell.2016.02.022. Epub 2016 Mar 3. PMID:26949186
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (530 Kb) [Save to disk]
  • Biological Unit Coordinates (5f9w.pdb1.gz) 261 Kb
  • Biological Unit Coordinates (5f9w.pdb2.gz) 261 Kb
  • LPC: Ligand-Protein Contacts for 5F9W
  • CSU: Contacts of Structural Units for 5F9W
  • Structure Factors (347 Kb)
  • Retrieve 5F9W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5F9W from S2C, [Save to disk]
  • Re-refined 5f9w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5F9W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5f9w] [5f9w_A] [5f9w_B] [5f9w_C] [5f9w_G] [5f9w_H] [5f9w_L]
  • SWISS-PROT database:
  • Domains found in 5F9W: [IG_like] [IGv ] by SMART

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