5FFO	Cell Adhesion	date	Dec 18, 2015
title	Integrin Alpha V Beta 6 In Complex With Pro-Tgf-Beta
authors	X.Dong, B.Zhao, T.A.Springer
compound		source
Molecule: Integrin Alpha-V Chain: A, E Fragment: Unp Residues 31-627 Synonym: Vitronectin Receptor Subunit Alpha Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Itgav, Msk8, Vnra Expression_system: Homo Sapiens Expression_system_taxid: 9606
Molecule: Integrin Beta-6 Chain: B, F Fragment: Unp Residues 128-378 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Itgb6 Expression_system: Homo Sapiens Expression_system_taxid: 9606
Molecule: Transforming Growth Factor Beta-1 Chain: C, D, G, H Fragment: Unp Residues 34-390 Synonym: Tgf-Beta-1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tgfb1, Tgfb Expression_system: Homo Sapiens Expression_system_taxid: 9606
symmetry	Space Group: P 1	R_factor 0.224 R_Free 0.277
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.440 91.440 131.030 89.98 86.25 89.85
method	X-Ray Diffraction	resolution	3.49 Å
ligand	BMA, CA, MAN, MN, NAG	enzyme
Gene Ontology	Chain Function Process Component A, E F, B H, C, D, G positive regulation of cellu... positive regulation of colla... cellular response to transfo...

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1032 Kb) [Save to disk] Biological Unit Coordinates (5ffo.pdb1.gz) 1015 Kb LPC: Ligand-Protein Contacts for 5FFO CSU: Contacts of Structural Units for 5FFO Structure Factors (387 Kb) Retrieve 5FFO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5FFO from S2C, [Save to disk] Re-refined 5ffo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5FFO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5FFO

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ffo_D] [5ffo_H] [5ffo_E] [5ffo_C] [5ffo] [5ffo_A] [5ffo_G] [5ffo_B] [5ffo_F] SWISS-PROT database: Domain organization of by SWISSPFAM

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