5FKV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A
  • DNA-directed DNA polymerase ...
  • 3'-5' exonuclease activity


  • B, C
  • 3'-5' exonuclease activity


  • D
  • DNA-directed DNA polymerase ...
  • nuclease activity
  • exonuclease activity
  • 3'-5' exonuclease activity


  • E


    Primary referencecryo-EM structures of the E. coli replicative DNA polymerase reveal dynamic interactions with clamp, exonuclease and tau., Fernandez-Leiro R, Conrad J, Scheres SH, Lamers MH, Elife. 2015 Oct 24;4. pii: e11134. doi: 10.7554/eLife.11134. PMID:26499492
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (314 Kb) [Save to disk]
  • Biological Unit Coordinates (5fkv.pdb1.gz) 309 Kb
  • CSU: Contacts of Structural Units for 5FKV
  • Retrieve 5FKV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FKV from S2C, [Save to disk]
  • View 5FKV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5fkv] [5fkv_A] [5fkv_B] [5fkv_C] [5fkv_D] [5fkv_E] [5fkv_P] [5fkv_T]
  • SWISS-PROT database:
  • Domains found in 5FKV: [EXOIII] [POL3Bc] [POLIIIAc ] by SMART

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