5FQ5	Hydrolase Dna	date	Dec 07, 2015
title	Crystal Structure Of Cas9-Sgrna-Dna Complex Solved By Native Phasing
authors	V.Olieric, T.Weinert, A.Finke, C.Anders, M.Jinek, M.Wang
compound		source
Molecule: Sgrna Chain: A Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Crispr-Associated Endonuclease Cas9csn1 Chain: B Synonym: Spycas9 Ec: 3.1.-.- Engineered: Yes Mutation: Yes		Organism_scientific: Streptococcus Pyogenes Organism_taxid: 1314 Gene: Cas9, Csn1, Spy_1046 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Rosetta2 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pec-K-Mbp
Molecule: Target Dna Strand Proximal Fragment Chain: C Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Non-Target Dna Strand Chain: D Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Target Dna Strand Distal Fragment Chain: E Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: C 1 2 1	R_factor 0.191 R_Free 0.225
crystal cell	length a length b length c angle alpha angle beta angle gamma 177.740 67.570 188.190 90.00 111.31 90.00
method	X-Ray Diffraction	resolution	2.14 Å
ligand	K, MG	enzyme	Hydrolase E.C.3.1 BRENDA
Gene	SPY
Gene Ontology	Chain Function Process Component B nuclease activity endonuclease activity exonuclease activity 3'-5' exonuclease activity

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (832 Kb) [Save to disk] Biological Unit Coordinates (5fq5.pdb1.gz) 819 Kb LPC: Ligand-Protein Contacts for 5FQ5 CSU: Contacts of Structural Units for 5FQ5 Structure Factors (1657 Kb) Retrieve 5FQ5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5FQ5 from S2C, [Save to disk] Re-refined 5fq5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5FQ5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5FQ5

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5fq5] [5fq5_A] [5fq5_E] [5fq5_D] [5fq5_C] [5fq5_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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