OCA Atlas for 5FVB

5FVB

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

GOL, MEN, PEB

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, J, A, L, U, D, T, F, E, W, O, X, I, S, Q, V, G, H, K, B, N, R, M, P

Primary reference

Crystal structure analysis of C-phycoerythrin from marine cyanobacterium Phormidium sp. A09DM., Kumar V, Sonani RR, Sharma M, Gupta GD, Madamwar D, Photosynth Res. 2016 Jul;129(1):17-28. doi: 10.1007/s11120-016-0259-5. Epub 2016 , Apr 11. PMID:27068646

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (785 Kb) [Save to disk]

Biological Unit Coordinates (5fvb.pdb1.gz) 387 Kb

Biological Unit Coordinates (5fvb.pdb2.gz) 386 Kb

LPC: Ligand-Protein Contacts for 5FVB

CSU: Contacts of Structural Units for 5FVB

Structure Factors (19325 Kb)

Retrieve 5FVB in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5FVB from S2C, [Save to disk]

Re-refined 5fvb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5FVB in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5fvb] [5fvb_A] [5fvb_B] [5fvb_C] [5fvb_D] [5fvb_E] [5fvb_F] [5fvb_G] [5fvb_H] [5fvb_I] [5fvb_J] [5fvb_K] [5fvb_L] [5fvb_M] [5fvb_N] [5fvb_O] [5fvb_P] [5fvb_Q] [5fvb_X] [5fvb_R] [5fvb_S] [5fvb_T] [5fvb_U] [5fvb_V] [5fvb_W]

SWISS-PROT database:

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