5GHM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 8DG, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural and Kinetic Studies of the Human Nudix Hydrolase MTH1 Reveal the Mechanism for Its Broad Substrate Specificity., Waz S, Nakamura T, Hirata K, Ogawa YK, Chirifu M, Arimori T, Tamada T, Ikemizu S, Nakabeppu Y, Yamagata Y, J Biol Chem. 2016 Dec 29. pii: jbc.M116.749713. doi: 10.1074/jbc.M116.749713. PMID:28035004
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]
  • Biological Unit Coordinates (5ghm.pdb1.gz) 62 Kb
  • Biological Unit Coordinates (5ghm.pdb2.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 5GHM
  • CSU: Contacts of Structural Units for 5GHM
  • Structure Factors (861 Kb)
  • Retrieve 5GHM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GHM from S2C, [Save to disk]
  • Re-refined 5ghm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5GHM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ghm_A] [5ghm] [5ghm_B]
  • SWISS-PROT database:

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