5GJI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, PTR, SO4 enzyme
Primary referenceCrystal Structures and Thermodynamic Analysis Reveal Distinct Mechanisms of CD28 Phosphopeptide Binding to the Src Homology 2 (SH2) Domains of Three Adaptor Proteins., Inaba S, Numoto N, Ogawa S, Morii H, Ikura T, Abe R, Ito N, Oda M, J Biol Chem. 2017 Jan 20;292(3):1052-1060. doi: 10.1074/jbc.M116.755173. Epub, 2016 Dec 6. PMID:27927989
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (5gji.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 5GJI
  • CSU: Contacts of Structural Units for 5GJI
  • Structure Factors (1146 Kb)
  • Retrieve 5GJI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GJI from S2C, [Save to disk]
  • Re-refined 5gji structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GJI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gji] [5gji_A] [5gji_B]
  • SWISS-PROT database:

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