5GKC date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceCrystal structure of endonuclease G in complex with DNA reveals how it nonspecifically degrades DNA as a homodimer., Lin JL, Wu CC, Yang WZ, Yuan HS, Nucleic Acids Res. 2016 Dec 1;44(21):10480-10490. Epub 2016 Oct 13. PMID:27738134
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (5gkc.pdb1.gz) 84 Kb
  • CSU: Contacts of Structural Units for 5GKC
  • Structure Factors (822 Kb)
  • Retrieve 5GKC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GKC from S2C, [Save to disk]
  • Re-refined 5gkc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5GKC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gkc] [5gkc_A] [5gkc_B]
  • SWISS-PROT database:
  • Domains found in 5GKC: [Endonuclease_NS] [NUC ] by SMART

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