5GKN date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
D, C, B, A
  • catalase activity
  • peroxidase activity


    • Primary referenceElectron crystallography of ultrathin 3D protein crystals: atomic model with charges., Yonekura K, Kato K, Ogasawara M, Tomita M, Toyoshima C, Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):3368-73. doi:, 10.1073/pnas.1500724112. Epub 2015 Feb 17. PMID:25730881
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (337 Kb) [Save to disk]
  • Biological Unit Coordinates (5gkn.pdb1.gz) 329 Kb
  • CSU: Contacts of Structural Units for 5GKN
  • Structure Factors (660 Kb)
  • Retrieve 5GKN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GKN from S2C, [Save to disk]
  • Re-refined 5gkn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GKN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gkn] [5gkn_A] [5gkn_B] [5gkn_C] [5gkn_D]
  • SWISS-PROT database:
  • Domain found in 5GKN: [Catalase ] by SMART

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