5GQC date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, NA enzyme
Primary referenceMolecular Insight into Evolution of Symbiosis between Breast-Fed Infants and a Member of the Human Gut Microbiome Bifidobacterium longum., Yamada C, Gotoh A, Sakanaka M, Hattie M, Stubbs KA, Katayama-Ikegami A, Hirose J, Kurihara S, Arakawa T, Kitaoka M, Okuda S, Katayama T, Fushinobu S, Cell Chem Biol. 2017 Apr 4. pii: S2451-9456(17)30095-8. doi:, 10.1016/j.chembiol.2017.03.012. PMID:28392148
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (731 Kb) [Save to disk]
  • Biological Unit Coordinates (5gqc.pdb1.gz) 99 Kb
  • Biological Unit Coordinates (5gqc.pdb2.gz) 100 Kb
  • Biological Unit Coordinates (5gqc.pdb3.gz) 99 Kb
  • Biological Unit Coordinates (5gqc.pdb4.gz) 100 Kb
  • Biological Unit Coordinates (5gqc.pdb5.gz) 101 Kb
  • Biological Unit Coordinates (5gqc.pdb6.gz) 101 Kb
  • Biological Unit Coordinates (5gqc.pdb7.gz) 100 Kb
  • Biological Unit Coordinates (5gqc.pdb8.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 5GQC
  • CSU: Contacts of Structural Units for 5GQC
  • Structure Factors (4494 Kb)
  • Retrieve 5GQC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GQC from S2C, [Save to disk]
  • Re-refined 5gqc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GQC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gqc] [5gqc_A] [5gqc_B] [5gqc_C] [5gqc_D] [5gqc_E] [5gqc_F] [5gqc_G] [5gqc_H]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science