5HKM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 61Y, SEP, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of novel 7-azaindoles as PDK1 inhibitors., Wucherer-Plietker M, Merkul E, Muller TJ, Esdar C, Knochel T, Heinrich T, Buchstaller HP, Greiner H, Dorsch D, Finsinger D, Calderini M, Bruge D, Gradler U, Bioorg Med Chem Lett. 2016 Jul 1;26(13):3073-80. doi: 10.1016/j.bmcl.2016.05.005., Epub 2016 May 4. PMID:27217002
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (5hkm.pdb1.gz) 94 Kb
  • LPC: Ligand-Protein Contacts for 5HKM
  • CSU: Contacts of Structural Units for 5HKM
  • Structure Factors (205 Kb)
  • Retrieve 5HKM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HKM from S2C, [Save to disk]
  • Re-refined 5hkm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5HKM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hkm] [5hkm_A]
  • SWISS-PROT database:
  • Domain found in 5HKM: [S_TKc ] by SMART

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